Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RAB5AP20339 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB5AP20339 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB5AP20339 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 TCAF2P1-201ENST00000291129 2421 ntBASIC14.15□□□□□ -0.14
RAB5AP20339 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
RAB5AP20339 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
RAB5AP20339 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 AC007322.3-201ENST00000426526 701 ntBASIC14.15□□□□□ -0.14
RAB5AP20339 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB5AP20339 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB5AP20339 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.15□□□□□ -0.14
RAB5AP20339 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB5AP20339 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB5AP20339 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB5AP20339 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.15□□□□□ -0.14
RAB5AP20339 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB5AP20339 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB5AP20339 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
RAB5AP20339 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5AP20339 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RAB5AP20339 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5AP20339 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5AP20339 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5AP20339 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 AC024909.3-201ENST00000611513 2257 ntBASIC14.14□□□□□ -0.15
RAB5AP20339 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.14□□□□□ -0.15
RAB5AP20339 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RAB5AP20339 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5AP20339 FLJ16779-201ENST00000612722 7638 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms