Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.91■□□□□ 0.94
SCG2P13521 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.91■□□□□ 0.94
SCG2P13521 PCED1CP-201ENST00000419887 785 ntBASIC20.91■□□□□ 0.94
SCG2P13521 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SCG2P13521 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.91■□□□□ 0.94
SCG2P13521 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.91■□□□□ 0.94
SCG2P13521 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.91■□□□□ 0.94
SCG2P13521 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SCG2P13521 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.91■□□□□ 0.94
SCG2P13521 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SCG2P13521 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.91■□□□□ 0.94
SCG2P13521 AC116407.4-201ENST00000623319 1061 ntBASIC20.91■□□□□ 0.94
SCG2P13521 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCG2P13521 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG2P13521 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
SCG2P13521 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SCG2P13521 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 RNF165-205ENST00000588679 2904 ntBASIC20.9■□□□□ 0.94
SCG2P13521 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.9■□□□□ 0.94
SCG2P13521 AL353692.3-201ENST00000407031 1396 ntBASIC20.9■□□□□ 0.94
SCG2P13521 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG2P13521 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.9■□□□□ 0.94
SCG2P13521 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 AC011498.5-201ENST00000592027 486 ntBASIC20.9■□□□□ 0.94
SCG2P13521 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.9■□□□□ 0.94
SCG2P13521 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.9■□□□□ 0.94
SCG2P13521 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCG2P13521 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SCG2P13521 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.89■□□□□ 0.94
SCG2P13521 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
SCG2P13521 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SCG2P13521 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.89■□□□□ 0.93
SCG2P13521 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SCG2P13521 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.89■□□□□ 0.93
SCG2P13521 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 AP000550.4-202ENST00000639755 178 ntBASIC20.89■□□□□ 0.93
SCG2P13521 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.89■□□□□ 0.93
SCG2P13521 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCG2P13521 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG2P13521 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCG2P13521 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCG2P13521 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCG2P13521 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCG2P13521 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCG2P13521 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms