Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CDH1P12830 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 RCN1P1-201ENST00000400413 996 ntBASIC17.75■□□□□ 0.43
CDH1P12830 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.75■□□□□ 0.43
CDH1P12830 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 AL441883.1-201ENST00000566170 1045 ntBASIC17.75■□□□□ 0.43
CDH1P12830 AC092865.7-201ENST00000641832 219 ntBASIC17.75■□□□□ 0.43
CDH1P12830 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
CDH1P12830 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.75■□□□□ 0.43
CDH1P12830 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDH1P12830 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
CDH1P12830 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
CDH1P12830 AC117947.1-201ENST00000427448 529 ntBASIC17.74■□□□□ 0.43
CDH1P12830 YBX1P2-201ENST00000489612 999 ntBASIC17.74■□□□□ 0.43
CDH1P12830 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 RN7SL850P-201ENST00000579959 291 ntBASIC17.74■□□□□ 0.43
CDH1P12830 AC011558.1-201ENST00000623459 338 ntBASIC17.74■□□□□ 0.43
CDH1P12830 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.74■□□□□ 0.43
CDH1P12830 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.74■□□□□ 0.43
CDH1P12830 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDH1P12830 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.74■□□□□ 0.43
CDH1P12830 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDH1P12830 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 SDHAP2-201ENST00000455183 2001 ntBASIC17.73■□□□□ 0.43
CDH1P12830 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH1P12830 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.73■□□□□ 0.43
CDH1P12830 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH1P12830 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.73■□□□□ 0.43
CDH1P12830 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 AC009065.1-201ENST00000564055 1225 ntBASIC17.73■□□□□ 0.43
CDH1P12830 AC006011.2-201ENST00000621313 1158 ntBASIC17.73■□□□□ 0.43
CDH1P12830 AL031432.5-201ENST00000641059 760 ntBASIC17.73■□□□□ 0.43
CDH1P12830 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH1P12830 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
CDH1P12830 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH1P12830 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH1P12830 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH1P12830 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH1P12830 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms