Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 MIR149-201ENST00000384879 89 ntBASIC14.22□□□□□ -0.13
CD28P10747 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 NUS1P2-201ENST00000417358 873 ntBASIC14.22□□□□□ -0.13
CD28P10747 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.22□□□□□ -0.13
CD28P10747 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 MINOS1P3-201ENST00000457048 203 ntBASIC14.22□□□□□ -0.13
CD28P10747 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.22□□□□□ -0.13
CD28P10747 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.22□□□□□ -0.13
CD28P10747 AP005901.3-202ENST00000581653 237 ntBASIC14.22□□□□□ -0.13
CD28P10747 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CD28P10747 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD28P10747 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD28P10747 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CD28P10747 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CD28P10747 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.21□□□□□ -0.13
CD28P10747 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 AC104692.2-201ENST00000603054 253 ntBASIC14.21□□□□□ -0.13
CD28P10747 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.21□□□□□ -0.13
CD28P10747 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.21□□□□□ -0.13
CD28P10747 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.21□□□□□ -0.13
CD28P10747 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD28P10747 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD28P10747 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD28P10747 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.21□□□□□ -0.14
CD28P10747 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD28P10747 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CD28P10747 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.21□□□□□ -0.14
CD28P10747 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CD28P10747 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.21□□□□□ -0.14
CD28P10747 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.2□□□□□ -0.14
CD28P10747 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 AC009102.3-201ENST00000623118 1491 ntBASIC14.2□□□□□ -0.14
CD28P10747 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 BX323043.1-201ENST00000641006 1765 ntBASIC14.2□□□□□ -0.14
CD28P10747 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.2□□□□□ -0.14
CD28P10747 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD28P10747 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.2□□□□□ -0.14
CD28P10747 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.2□□□□□ -0.14
CD28P10747 AL160237.2-201ENST00000556165 472 ntBASIC14.2□□□□□ -0.14
CD28P10747 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.2□□□□□ -0.14
CD28P10747 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC14.2□□□□□ -0.14
CD28P10747 AL353801.3-201ENST00000609898 542 ntBASIC14.2□□□□□ -0.14
CD28P10747 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms