Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.43□□□□□ -0.1
PF4V1P10720 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.43□□□□□ -0.1
PF4V1P10720 PRELID1P1-202ENST00000567272 903 ntBASIC14.43□□□□□ -0.1
PF4V1P10720 AL121894.2-201ENST00000602977 491 ntBASIC14.43□□□□□ -0.1
PF4V1P10720 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.43□□□□□ -0.1
PF4V1P10720 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
PF4V1P10720 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PF4V1P10720 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PF4V1P10720 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PF4V1P10720 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PF4V1P10720 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 AL031598.1-201ENST00000561511 1773 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 AC004408.2-201ENST00000623613 2777 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 OR6D1P-203ENST00000641209 4860 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 TPM4P1-201ENST00000436100 807 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 AC092597.1-201ENST00000487352 616 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 KRT18P41-201ENST00000518924 1277 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.42□□□□□ -0.1
PF4V1P10720 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 AL121672.3-201ENST00000608644 468 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
PF4V1P10720 AC099343.3-201ENST00000605834 2503 ntBASIC14.42□□□□□ -0.1
PF4V1P10720 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PF4V1P10720 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PF4V1P10720 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.42□□□□□ -0.1
PF4V1P10720 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PF4V1P10720 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.41□□□□□ -0.1
PF4V1P10720 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 ATP5G2P1-201ENST00000433580 426 ntBASIC14.41□□□□□ -0.1
PF4V1P10720 DUSP5P1-201ENST00000441325 1139 ntBASIC14.41□□□□□ -0.1
PF4V1P10720 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.41□□□□□ -0.1
PF4V1P10720 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.41□□□□□ -0.1
PF4V1P10720 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.41□□□□□ -0.1
PF4V1P10720 AC092119.3-201ENST00000612618 583 ntBASIC14.41□□□□□ -0.1
PF4V1P10720 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.41□□□□□ -0.1
PF4V1P10720 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.41□□□□□ -0.1
PF4V1P10720 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PF4V1P10720 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
PF4V1P10720 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PF4V1P10720 AC093503.3-201ENST00000624917 2352 ntBASIC14.41□□□□□ -0.1
PF4V1P10720 AC106820.2-201ENST00000563775 3264 ntBASIC14.41□□□□□ -0.1
PF4V1P10720 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
PF4V1P10720 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
PF4V1P10720 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms