Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 AL023973.1-201ENST00000624619 620 ntBASIC17.92■□□□□ 0.46
CAPN1P07384 AL031432.5-201ENST00000641059 760 ntBASIC17.92■□□□□ 0.46
CAPN1P07384 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
CAPN1P07384 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CAPN1P07384 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CAPN1P07384 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CAPN1P07384 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN1P07384 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.91■□□□□ 0.46
CAPN1P07384 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.91■□□□□ 0.46
CAPN1P07384 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.91■□□□□ 0.46
CAPN1P07384 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.91■□□□□ 0.46
CAPN1P07384 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CAPN1P07384 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CAPN1P07384 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CAPN1P07384 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CAPN1P07384 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CAPN1P07384 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
CAPN1P07384 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.9■□□□□ 0.46
CAPN1P07384 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.9■□□□□ 0.46
CAPN1P07384 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 PCDHB18P-201ENST00000524813 2368 ntBASIC17.9■□□□□ 0.46
CAPN1P07384 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CAPN1P07384 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.9■□□□□ 0.46
CAPN1P07384 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 AC034236.2-201ENST00000606662 1610 ntBASIC17.9■□□□□ 0.46
CAPN1P07384 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CAPN1P07384 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.9■□□□□ 0.46
CAPN1P07384 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CAPN1P07384 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
CAPN1P07384 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.89■□□□□ 0.46
CAPN1P07384 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CAPN1P07384 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CAPN1P07384 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.89■□□□□ 0.45
CAPN1P07384 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 AP000593.1-201ENST00000393668 712 ntBASIC17.89■□□□□ 0.45
CAPN1P07384 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.89■□□□□ 0.45
CAPN1P07384 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.89■□□□□ 0.45
CAPN1P07384 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.89■□□□□ 0.45
CAPN1P07384 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.89■□□□□ 0.45
CAPN1P07384 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.89■□□□□ 0.45
CAPN1P07384 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.89■□□□□ 0.45
CAPN1P07384 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CAPN1P07384 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 AL358472.4-201ENST00000633140 710 ntBASIC17.89■□□□□ 0.45
CAPN1P07384 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CAPN1P07384 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CAPN1P07384 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms