Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
CDRT1O95170 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT1O95170 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDRT1O95170 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT1O95170 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 POM121L13P-201ENST00000422362 380 ntBASIC16.25■□□□□ 0.19
CDRT1O95170 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.25■□□□□ 0.19
CDRT1O95170 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.25■□□□□ 0.19
CDRT1O95170 PRKY-204ENST00000533551 1019 ntBASIC16.25■□□□□ 0.19
CDRT1O95170 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 FER1L4-210ENST00000615531 5998 ntBASIC16.25■□□□□ 0.19
CDRT1O95170 MYLKP1-201ENST00000509077 1580 ntBASIC16.25■□□□□ 0.19
CDRT1O95170 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDRT1O95170 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDRT1O95170 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDRT1O95170 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDRT1O95170 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.24■□□□□ 0.19
CDRT1O95170 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.24■□□□□ 0.19
CDRT1O95170 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.24■□□□□ 0.19
CDRT1O95170 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDRT1O95170 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDRT1O95170 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CDRT1O95170 AC008894.3-201ENST00000624324 3103 ntBASIC16.23■□□□□ 0.19
CDRT1O95170 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 LINC00602-201ENST00000629776 2065 ntBASIC16.23■□□□□ 0.19
CDRT1O95170 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CDRT1O95170 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDRT1O95170 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.23■□□□□ 0.19
CDRT1O95170 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CDRT1O95170 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.23■□□□□ 0.19
CDRT1O95170 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDRT1O95170 HLA-A-209ENST00000638375 975 ntBASIC16.23■□□□□ 0.19
CDRT1O95170 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.23■□□□□ 0.19
CDRT1O95170 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.23■□□□□ 0.19
CDRT1O95170 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CDRT1O95170 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms