Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 SLC25A6P5-201ENST00000435663 894 ntBASIC14.2□□□□□ -0.14
ZNF253O75346 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
ZNF253O75346 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.2□□□□□ -0.14
ZNF253O75346 AC104771.1-201ENST00000603335 964 ntBASIC14.2□□□□□ -0.14
ZNF253O75346 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ZNF253O75346 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.2□□□□□ -0.14
ZNF253O75346 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ZNF253O75346 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF253O75346 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF253O75346 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNF253O75346 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ZNF253O75346 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ZNF253O75346 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 AL391005.1-201ENST00000623953 2435 ntBASIC14.19□□□□□ -0.14
ZNF253O75346 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 AC239809.2-201ENST00000415381 517 ntBASIC14.19□□□□□ -0.14
ZNF253O75346 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF253O75346 AC026366.1-201ENST00000488803 879 ntBASIC14.19□□□□□ -0.14
ZNF253O75346 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF253O75346 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.19□□□□□ -0.14
ZNF253O75346 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.19□□□□□ -0.14
ZNF253O75346 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ZNF253O75346 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.18□□□□□ -0.14
ZNF253O75346 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 NIFKP9-201ENST00000419265 221 ntBASIC14.18□□□□□ -0.14
ZNF253O75346 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 AC133681.1-201ENST00000465482 601 ntBASIC14.18□□□□□ -0.14
ZNF253O75346 KRT18P41-201ENST00000518924 1277 ntBASIC14.18□□□□□ -0.14
ZNF253O75346 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.18□□□□□ -0.14
ZNF253O75346 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.18□□□□□ -0.14
ZNF253O75346 AL353708.3-201ENST00000610272 989 ntBASIC14.18□□□□□ -0.14
ZNF253O75346 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.18□□□□□ -0.14
ZNF253O75346 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.18□□□□□ -0.14
ZNF253O75346 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ZNF253O75346 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms