Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRAMEF4O60810 AL391807.1-203ENST00000604392 2365 ntBASIC17.51■□□□□ 0.39
PRAMEF4O60810 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 STARP1-201ENST00000397973 869 ntBASIC17.5■□□□□ 0.39
PRAMEF4O60810 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 AL031432.5-201ENST00000641059 760 ntBASIC17.5■□□□□ 0.39
PRAMEF4O60810 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
PRAMEF4O60810 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PRAMEF4O60810 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 AC020763.4-201ENST00000623414 4170 ntBASIC17.49■□□□□ 0.39
PRAMEF4O60810 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.49■□□□□ 0.39
PRAMEF4O60810 HLA-F-220ENST00000434407 884 ntBASIC17.49■□□□□ 0.39
PRAMEF4O60810 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 AC134043.2-201ENST00000624206 2238 ntBASIC17.49■□□□□ 0.39
PRAMEF4O60810 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
PRAMEF4O60810 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.49■□□□□ 0.39
PRAMEF4O60810 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 TSPY5P-201ENST00000426936 936 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 SLC25A6P5-201ENST00000435663 894 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 AC034232.1-201ENST00000506026 1064 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 AL136038.4-201ENST00000603606 1261 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 HYMAI.1-201ENST00000620949 238 ntBASIC17.48■□□□□ 0.39
PRAMEF4O60810 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.48■□□□□ 0.39
PRAMEF4O60810 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PRAMEF4O60810 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms