Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A2O43868 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC28A2O43868 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SLC28A2O43868 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC28A2O43868 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 AC135050.7-201ENST00000624508 2218 ntBASIC17.54■□□□□ 0.4
SLC28A2O43868 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 AC079781.3-201ENST00000449110 356 ntBASIC17.54■□□□□ 0.4
SLC28A2O43868 CA15P1-201ENST00000481698 905 ntBASIC17.54■□□□□ 0.4
SLC28A2O43868 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A2O43868 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC28A2O43868 GCSHP2-201ENST00000560971 527 ntBASIC17.54■□□□□ 0.4
SLC28A2O43868 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A2O43868 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC28A2O43868 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC28A2O43868 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC28A2O43868 OR6D1P-202ENST00000641007 5290 ntBASIC17.54■□□□□ 0.4
SLC28A2O43868 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A2O43868 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SLC28A2O43868 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC28A2O43868 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC28A2O43868 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC28A2O43868 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
SLC28A2O43868 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SLC28A2O43868 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 SPDYE15P-201ENST00000424157 909 ntBASIC17.53■□□□□ 0.4
SLC28A2O43868 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AL732292.2-201ENST00000609649 430 ntBASIC17.53■□□□□ 0.4
SLC28A2O43868 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC28A2O43868 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SLC28A2O43868 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AL390961.4-201ENST00000623958 2535 ntBASIC17.53■□□□□ 0.4
SLC28A2O43868 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.53■□□□□ 0.4
SLC28A2O43868 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.53■□□□□ 0.4
SLC28A2O43868 AC126763.1-201ENST00000552015 2118 ntBASIC17.53■□□□□ 0.4
SLC28A2O43868 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC28A2O43868 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.53■□□□□ 0.4
SLC28A2O43868 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.52■□□□□ 0.4
SLC28A2O43868 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SLC28A2O43868 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.52■□□□□ 0.4
SLC28A2O43868 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SLC28A2O43868 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 AL662844.1-201ENST00000546340 181 ntBASIC17.52■□□□□ 0.4
SLC28A2O43868 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.52■□□□□ 0.4
SLC28A2O43868 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SLC28A2O43868 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SLC28A2O43868 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC28A2O43868 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC28A2O43868 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.52■□□□□ 0.39
SLC28A2O43868 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SLC28A2O43868 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SLC28A2O43868 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms