Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC132938.6-201ENST00000623828 1655 ntBASIC20.42■□□□□ 0.86
ACTN4O43707 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ACTN4O43707 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
ACTN4O43707 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.42■□□□□ 0.86
ACTN4O43707 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.42■□□□□ 0.86
ACTN4O43707 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
ACTN4O43707 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.42■□□□□ 0.86
ACTN4O43707 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ACTN4O43707 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ACTN4O43707 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 KRT18P55-202ENST00000578578 1546 ntBASIC20.42■□□□□ 0.86
ACTN4O43707 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ACTN4O43707 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
ACTN4O43707 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.41■□□□□ 0.86
ACTN4O43707 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.41■□□□□ 0.86
ACTN4O43707 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.41■□□□□ 0.86
ACTN4O43707 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
ACTN4O43707 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.41■□□□□ 0.86
ACTN4O43707 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.41■□□□□ 0.86
ACTN4O43707 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.41■□□□□ 0.86
ACTN4O43707 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
ACTN4O43707 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.41■□□□□ 0.86
ACTN4O43707 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
ACTN4O43707 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ACTN4O43707 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
ACTN4O43707 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.4■□□□□ 0.86
ACTN4O43707 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 AC093827.2-201ENST00000512654 315 ntBASIC20.4■□□□□ 0.86
ACTN4O43707 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.4■□□□□ 0.86
ACTN4O43707 NEK4P2-201ENST00000580004 1012 ntBASIC20.4■□□□□ 0.86
ACTN4O43707 MIR3917-201ENST00000580971 93 ntBASIC20.4■□□□□ 0.86
ACTN4O43707 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACTN4O43707 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.4■□□□□ 0.86
ACTN4O43707 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACTN4O43707 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACTN4O43707 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACTN4O43707 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACTN4O43707 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ACTN4O43707 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ACTN4O43707 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.39■□□□□ 0.85
ACTN4O43707 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.39■□□□□ 0.85
ACTN4O43707 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.39■□□□□ 0.85
ACTN4O43707 ECEL1P3-201ENST00000427961 737 ntBASIC20.39■□□□□ 0.85
ACTN4O43707 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.39■□□□□ 0.85
ACTN4O43707 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.39■□□□□ 0.85
ACTN4O43707 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
ACTN4O43707 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.39■□□□□ 0.85
ACTN4O43707 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACTN4O43707 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms