Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA2O43364 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXA2O43364 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXA2O43364 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.41■□□□□ 0.7
HOXA2O43364 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXA2O43364 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 AL139288.1-201ENST00000623748 933 ntBASIC19.41■□□□□ 0.7
HOXA2O43364 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HOXA2O43364 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
HOXA2O43364 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA2O43364 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA2O43364 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 ANO7L1-203ENST00000602586 1720 ntBASIC19.4■□□□□ 0.7
HOXA2O43364 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXA2O43364 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 AL356309.3-201ENST00000624132 1934 ntBASIC19.4■□□□□ 0.7
HOXA2O43364 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXA2O43364 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HOXA2O43364 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXA2O43364 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
HOXA2O43364 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
HOXA2O43364 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXA2O43364 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXA2O43364 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXA2O43364 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.39■□□□□ 0.7
HOXA2O43364 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXA2O43364 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 FAM220CP-201ENST00000395253 831 ntBASIC19.39■□□□□ 0.69
HOXA2O43364 KRT18P13-201ENST00000400056 1290 ntBASIC19.39■□□□□ 0.69
HOXA2O43364 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 RPL13AP23-201ENST00000480739 586 ntBASIC19.39■□□□□ 0.69
HOXA2O43364 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXA2O43364 AC021087.4-201ENST00000563761 564 ntBASIC19.39■□□□□ 0.69
HOXA2O43364 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXA2O43364 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXA2O43364 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXA2O43364 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
HOXA2O43364 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HOXA2O43364 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXA2O43364 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.38■□□□□ 0.69
HOXA2O43364 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXA2O43364 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms