Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 BNIP3P18-201ENST00000593976 575 ntBASIC21.69■■□□□ 1.06
FOXN1O15353 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN1O15353 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN1O15353 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXN1O15353 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXN1O15353 KRT18P23-201ENST00000435622 1283 ntBASIC21.68■■□□□ 1.06
FOXN1O15353 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 SNHG9-202ENST00000564014 471 ntBASIC21.68■■□□□ 1.06
FOXN1O15353 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 GPR32P1-201ENST00000601788 811 ntBASIC21.68■■□□□ 1.06
FOXN1O15353 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.68■■□□□ 1.06
FOXN1O15353 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXN1O15353 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXN1O15353 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.68■■□□□ 1.06
FOXN1O15353 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXN1O15353 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXN1O15353 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
FOXN1O15353 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
FOXN1O15353 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.67■■□□□ 1.06
FOXN1O15353 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.67■■□□□ 1.06
FOXN1O15353 RNA5SP415-201ENST00000517246 115 ntBASIC21.67■■□□□ 1.06
FOXN1O15353 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
FOXN1O15353 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXN1O15353 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXN1O15353 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXN1O15353 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.66■■□□□ 1.06
FOXN1O15353 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FOXN1O15353 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 AC023274.1-201ENST00000418278 595 ntBASIC21.66■■□□□ 1.06
FOXN1O15353 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.66■■□□□ 1.06
FOXN1O15353 AC092910.1-201ENST00000482027 1129 ntBASIC21.66■■□□□ 1.06
FOXN1O15353 RNA5SP416-201ENST00000516838 111 ntBASIC21.66■■□□□ 1.06
FOXN1O15353 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.66■■□□□ 1.06
FOXN1O15353 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.66■■□□□ 1.06
FOXN1O15353 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 MTDHP5-201ENST00000598980 586 ntBASIC21.66■■□□□ 1.06
FOXN1O15353 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXN1O15353 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
FOXN1O15353 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
FOXN1O15353 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXN1O15353 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXN1O15353 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 NEFHP1-201ENST00000412845 2629 ntBASIC21.65■■□□□ 1.06
FOXN1O15353 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC21.65■■□□□ 1.06
FOXN1O15353 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXN1O15353 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXN1O15353 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXN1O15353 AP001269.4-201ENST00000609611 512 ntBASIC21.65■■□□□ 1.06
FOXN1O15353 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXN1O15353 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXN1O15353 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXN1O15353 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms