Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NDUFA1O15239 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NDUFA1O15239 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.48□□□□□ -0.41
NDUFA1O15239 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFA1O15239 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NDUFA1O15239 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFA1O15239 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFA1O15239 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.47□□□□□ -0.41
NDUFA1O15239 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFA1O15239 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 AC090192.1-201ENST00000517740 490 ntBASIC12.47□□□□□ -0.41
NDUFA1O15239 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.47□□□□□ -0.41
NDUFA1O15239 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
NDUFA1O15239 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.47□□□□□ -0.41
NDUFA1O15239 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.47□□□□□ -0.41
NDUFA1O15239 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
NDUFA1O15239 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFA1O15239 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NDUFA1O15239 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.47□□□□□ -0.41
NDUFA1O15239 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFA1O15239 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFA1O15239 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.46□□□□□ -0.41
NDUFA1O15239 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.46□□□□□ -0.41
NDUFA1O15239 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC12.46□□□□□ -0.41
NDUFA1O15239 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.46□□□□□ -0.41
NDUFA1O15239 KRT16P5-201ENST00000455284 522 ntBASIC12.46□□□□□ -0.41
NDUFA1O15239 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
NDUFA1O15239 AC026366.1-201ENST00000488803 879 ntBASIC12.46□□□□□ -0.41
NDUFA1O15239 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.46□□□□□ -0.41
NDUFA1O15239 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
NDUFA1O15239 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NDUFA1O15239 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NDUFA1O15239 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.46□□□□□ -0.42
NDUFA1O15239 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.46□□□□□ -0.42
NDUFA1O15239 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 KRT8P32-201ENST00000512863 1461 ntBASIC12.46□□□□□ -0.42
NDUFA1O15239 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.46□□□□□ -0.42
NDUFA1O15239 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NDUFA1O15239 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.45□□□□□ -0.42
NDUFA1O15239 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NDUFA1O15239 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NDUFA1O15239 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 AL121761.2-201ENST00000598007 1648 ntBASIC12.45□□□□□ -0.42
NDUFA1O15239 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NDUFA1O15239 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms