Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PFDN6O15212 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.24■□□□□ 0.51
PFDN6O15212 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN6O15212 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PFDN6O15212 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.24■□□□□ 0.51
PFDN6O15212 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 NOC2LP1-202ENST00000452600 2235 ntBASIC18.23■□□□□ 0.51
PFDN6O15212 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PFDN6O15212 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.23■□□□□ 0.51
PFDN6O15212 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 AC087499.1-201ENST00000418141 1075 ntBASIC18.23■□□□□ 0.51
PFDN6O15212 ECEL1P3-201ENST00000427961 737 ntBASIC18.23■□□□□ 0.51
PFDN6O15212 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.23■□□□□ 0.51
PFDN6O15212 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.23■□□□□ 0.51
PFDN6O15212 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PFDN6O15212 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PFDN6O15212 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PFDN6O15212 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PFDN6O15212 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.23■□□□□ 0.51
PFDN6O15212 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
PFDN6O15212 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PFDN6O15212 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
PFDN6O15212 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PFDN6O15212 ATP5G1P1-201ENST00000448724 379 ntBASIC18.22■□□□□ 0.51
PFDN6O15212 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.22■□□□□ 0.51
PFDN6O15212 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PFDN6O15212 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 AC024243.1-201ENST00000609234 778 ntBASIC18.22■□□□□ 0.51
PFDN6O15212 AL031432.5-201ENST00000641059 760 ntBASIC18.22■□□□□ 0.51
PFDN6O15212 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
PFDN6O15212 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PFDN6O15212 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.22■□□□□ 0.51
PFDN6O15212 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PFDN6O15212 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PFDN6O15212 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.21■□□□□ 0.51
PFDN6O15212 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN6O15212 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN6O15212 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN6O15212 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PFDN6O15212 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN6O15212 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PFDN6O15212 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.21■□□□□ 0.51
PFDN6O15212 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PFDN6O15212 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.21■□□□□ 0.51
PFDN6O15212 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.21■□□□□ 0.51
PFDN6O15212 AC034232.1-201ENST00000506026 1064 ntBASIC18.21■□□□□ 0.51
PFDN6O15212 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PFDN6O15212 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.21■□□□□ 0.51
PFDN6O15212 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.21■□□□□ 0.51
PFDN6O15212 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms