Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COPEO14579 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 GPAT2P1-201ENST00000444924 1672 ntBASIC18.22■□□□□ 0.51
COPEO14579 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COPEO14579 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 MIR935-201ENST00000401179 91 ntBASIC18.22■□□□□ 0.51
COPEO14579 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 AC011506.1-201ENST00000474329 610 ntBASIC18.22■□□□□ 0.51
COPEO14579 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.22■□□□□ 0.51
COPEO14579 RN7SL471P-201ENST00000580476 299 ntBASIC18.22■□□□□ 0.51
COPEO14579 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.22■□□□□ 0.51
COPEO14579 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COPEO14579 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COPEO14579 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COPEO14579 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
COPEO14579 PCDHA12-202ENST00000613593 2588 ntBASIC18.22■□□□□ 0.51
COPEO14579 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.22■□□□□ 0.51
COPEO14579 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COPEO14579 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 PP12613-201ENST00000424958 2230 ntBASIC18.21■□□□□ 0.51
COPEO14579 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
COPEO14579 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
COPEO14579 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.21■□□□□ 0.51
COPEO14579 MIR6786-201ENST00000616843 113 ntBASIC18.21■□□□□ 0.51
COPEO14579 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
COPEO14579 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COPEO14579 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COPEO14579 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.2■□□□□ 0.5
COPEO14579 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COPEO14579 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
COPEO14579 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 SDHAP2-201ENST00000455183 2001 ntBASIC18.2■□□□□ 0.5
COPEO14579 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.2■□□□□ 0.5
COPEO14579 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 AC080080.1-201ENST00000625121 2420 ntBASIC18.2■□□□□ 0.5
COPEO14579 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 AC141586.5-201ENST00000624546 2050 ntBASIC18.2■□□□□ 0.5
COPEO14579 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.2■□□□□ 0.5
COPEO14579 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.2■□□□□ 0.5
COPEO14579 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 B3GAT3P1-201ENST00000471720 806 ntBASIC18.2■□□□□ 0.5
COPEO14579 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
COPEO14579 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.2■□□□□ 0.5
COPEO14579 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.2■□□□□ 0.5
COPEO14579 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COPEO14579 AC009102.3-201ENST00000623118 1491 ntBASIC18.2■□□□□ 0.5
COPEO14579 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.19■□□□□ 0.5
COPEO14579 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COPEO14579 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 KRT18P55-202ENST00000578578 1546 ntBASIC18.19■□□□□ 0.5
COPEO14579 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.19■□□□□ 0.5
COPEO14579 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
COPEO14579 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms