Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL845331.1-201ENST00000424978 1190 ntBASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC009065.1-201ENST00000564055 1225 ntBASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TMX2-CTNND1H3BSU7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL512353.2-201ENST00000448759 1962 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 BICD1-207ENST00000551848 1962 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 RCC2P3-201ENST00000418112 1537 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC091304.2-201ENST00000564639 760 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC012615.1-201ENST00000565797 1299 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 WIZP1-201ENST00000531444 2299 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC090164.3-201ENST00000610780 2143 ntBASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TMX2-CTNND1H3BSU7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TMX2-CTNND1H3BSU7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 MIR564-202ENST00000385049 94 ntBASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 PVRIG2P-201ENST00000435460 978 ntBASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.83■□□□□ 0.44
TMX2-CTNND1H3BSU7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms