Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 AC093677.2-201ENST00000600169 1863 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 NIFKP9-201ENST00000419265 221 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 FDX1P1-201ENST00000449115 551 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 AC004263.2-201ENST00000617183 678 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 AC012313.10-201ENST00000623509 926 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 TFP1-202ENST00000475455 1573 ntBASIC18.88■□□□□ 0.61
SRRM3A6NNA2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SRRM3A6NNA2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 YBX1P2-201ENST00000489612 999 ntBASIC18.87■□□□□ 0.61
SRRM3A6NNA2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 AL121906.2-201ENST00000621597 723 ntBASIC18.87■□□□□ 0.61
SRRM3A6NNA2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.87■□□□□ 0.61
SRRM3A6NNA2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 AP005242.2-201ENST00000580065 1175 ntBASIC18.86■□□□□ 0.61
SRRM3A6NNA2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 HTR7P1-202ENST00000624664 4411 ntBASIC18.86■□□□□ 0.61
SRRM3A6NNA2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.86■□□□□ 0.61
SRRM3A6NNA2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 INGX-201ENST00000359239 846 ntBASIC18.85■□□□□ 0.61
SRRM3A6NNA2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.85■□□□□ 0.61
SRRM3A6NNA2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRRM3A6NNA2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms