Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SPDYE21P-201ENST00000413323 827 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 AC007967.3-201ENST00000434308 558 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 AC067863.1-201ENST00000494933 530 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 DUX4L27-201ENST00000554796 1261 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 AC096734.2-201ENST00000562054 433 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 KRT8P47-201ENST00000604727 1398 ntBASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEM88BA6NKF7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 RPS15P9-201ENST00000494093 319 ntBASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 AC015911.4-201ENST00000588022 1070 ntBASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 AL359881.2-201ENST00000602973 570 ntBASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 AC010507.1-201ENST00000633895 436 ntBASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TMEM88BA6NKF7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 MEIS3P1-201ENST00000495167 958 ntBASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 RN7SL204P-201ENST00000582831 262 ntBASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 AC010654.1-201ENST00000615722 808 ntBASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 AD001527.2-201ENST00000622994 785 ntBASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEM88BA6NKF7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM88BA6NKF7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
TMEM88BA6NKF7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEM88BA6NKF7 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 OR8S1-201ENST00000310194 1080 ntBASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 SIGLEC30P-201ENST00000455569 941 ntBASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 AC022145.2-201ENST00000598203 171 ntBASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 AC092902.6-201ENST00000641783 218 ntBASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEM88BA6NKF7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TMEM88BA6NKF7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC21■□□□□ 0.95
TMEM88BA6NKF7 HNRNPFP1-201ENST00000391730 1133 ntBASIC21■□□□□ 0.95
TMEM88BA6NKF7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms