Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SHISA3A0PJX4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 LINC01126-201ENST00000623515 1646 ntBASIC15.87■□□□□ 0.13
SHISA3A0PJX4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 AC133963.1-201ENST00000504166 1679 ntBASIC15.87■□□□□ 0.13
SHISA3A0PJX4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.87■□□□□ 0.13
SHISA3A0PJX4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SHISA3A0PJX4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AC100803.2-201ENST00000562459 1963 ntBASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AL023284.2-201ENST00000405850 579 ntBASIC15.86■□□□□ 0.13
SHISA3A0PJX4 NCF1B-203ENST00000435988 1254 ntBASIC15.86■□□□□ 0.13
SHISA3A0PJX4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.86■□□□□ 0.13
SHISA3A0PJX4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 AC034236.2-201ENST00000606662 1610 ntBASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.86■□□□□ 0.13
SHISA3A0PJX4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 CICP6-201ENST00000457191 2729 ntBASIC15.85■□□□□ 0.13
SHISA3A0PJX4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SHISA3A0PJX4 AC105020.1-201ENST00000435356 2205 ntBASIC15.85■□□□□ 0.13
SHISA3A0PJX4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms