Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNF444P1-201ENST00000559497 298 ntBASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC196A0A1B0GTZ2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 FLJ13224-201ENST00000313737 1514 ntBASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCDC196A0A1B0GTZ2 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CCDC196A0A1B0GTZ2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 AC138028.4-201ENST00000564984 1845 ntBASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 AL590326.2-201ENST00000625139 305 ntBASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.13■□□□□ 0.97
CCDC196A0A1B0GTZ2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC196A0A1B0GTZ2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms