Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AP002982.1-201ENST00000492365 877 ntBASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AP003097.1-201ENST00000530657 1135 ntBASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AL023875.1-201ENST00000640777 796 ntBASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV27A0A0K0K1C4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 AC133681.1-201ENST00000465482 601 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 AC008622.2-201ENST00000617006 1229 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 AC130371.2-201ENST00000619443 611 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ABBA01031674.1-201ENST00000635145 728 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 AL031985.4-201ENST00000642138 673 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 KRT16P1-201ENST00000399124 1418 ntBASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
TRBV27A0A0K0K1C4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PKD1P1-201ENST00000458669 6805 ntBASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 AL355312.1-201ENST00000407115 2176 ntBASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TRBV27A0A0K0K1C4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms