Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTCBQ9Y3I0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RTCBQ9Y3I0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RTCBQ9Y3I0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTCBQ9Y3I0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 AC211486.1-202ENST00000416371 468 ntBASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 BX005266.1-201ENST00000473402 457 ntBASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 AC211476.1-201ENST00000503899 468 ntBASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTCBQ9Y3I0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 AC064836.3-201ENST00000607928 673 ntBASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 MIR1199-201ENST00000621445 119 ntBASIC22.86■■□□□ 1.25
RTCBQ9Y3I0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms