Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 MIR3180-5-201ENST00000583743 153 ntBASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 FAM197Y4-202ENST00000622692 608 ntBASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MRPS28Q9Y2Q9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
MRPS28Q9Y2Q9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.71■□□□□ 0.1
MRPS28Q9Y2Q9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.1
MRPS28Q9Y2Q9 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 DGCR10-201ENST00000609839 495 ntBASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 AC009102.3-201ENST00000623118 1491 ntBASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
MRPS28Q9Y2Q9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CD177P1-201ENST00000606252 935 ntBASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
MRPS28Q9Y2Q9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 AL163051.1-201ENST00000569214 1512 ntBASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
MRPS28Q9Y2Q9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms