Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 AC092329.2-201ENST00000598402 547 ntBASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
FNDC3AQ9Y2H6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AC034232.1-201ENST00000506026 1064 ntBASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 RN7SL510P-201ENST00000581311 263 ntBASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC3AQ9Y2H6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 AC093525.10-201ENST00000625130 1569 ntBASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 MIR564-202ENST00000385049 94 ntBASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC3AQ9Y2H6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 TSSC2-201ENST00000450217 709 ntBASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 AC011498.5-201ENST00000592027 486 ntBASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
FNDC3AQ9Y2H6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms