Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 AC073621.1-201ENST00000392730 636 ntBASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ZC3H4Q9UPT8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
ZC3H4Q9UPT8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
ZC3H4Q9UPT8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 PRSS29P-201ENST00000440800 595 ntBASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AC136632.2-201ENST00000512891 861 ntBASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AC027612.4-201ENST00000605371 583 ntBASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 AL022326.1-202ENST00000641533 845 ntBASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ZC3H4Q9UPT8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 MIR149-201ENST00000384879 89 ntBASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 AL513190.1-201ENST00000621254 727 ntBASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 AC097374.2-201ENST00000618617 1306 ntBASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.94■■□□□ 1.1
ZC3H4Q9UPT8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.93■■□□□ 1.1
ZC3H4Q9UPT8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 AC073592.4-201ENST00000623827 446 ntBASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ZC3H4Q9UPT8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms