Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BLOC1S4Q9NUP1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 LINC00602-201ENST00000629776 2065 ntBASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 LINC01311-201ENST00000565162 1445 ntBASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BLOC1S4Q9NUP1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 DUTP2-201ENST00000519164 463 ntBASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BLOC1S4Q9NUP1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 AC008687.5-201ENST00000593746 558 ntBASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BLOC1S4Q9NUP1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 AL671277.2-201ENST00000458060 996 ntBASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.22■□□□□ 0.83
BLOC1S4Q9NUP1 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms