Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A20Q9NP91 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SLC6A20Q9NP91 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SLC6A20Q9NP91 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 Z83836.1-201ENST00000624605 1642 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 KRT18P56-201ENST00000507275 550 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 AC113404.2-201ENST00000507884 177 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 AC011498.5-201ENST00000592027 486 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 AC008687.5-201ENST00000593746 558 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 GPR32P1-201ENST00000601788 811 ntBASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A20Q9NP91 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 AC069148.1-201ENST00000608741 768 ntBASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 LINC00167-201ENST00000530583 1419 ntBASIC17.46■□□□□ 0.39
SLC6A20Q9NP91 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SLC6A20Q9NP91 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.46■□□□□ 0.38
SLC6A20Q9NP91 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 AC093010.1-201ENST00000473625 1624 ntBASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 BICD1-207ENST00000551848 1962 ntBASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A20Q9NP91 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms