Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 AC092364.2-202ENST00000597012 1073 ntBASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 AC099343.3-201ENST00000605834 2503 ntBASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZFYVE28Q9HCC9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 KRT18P2-201ENST00000447938 1258 ntBASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 AC112698.1-201ENST00000510299 916 ntBASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.72■□□□□ 0.91
ZFYVE28Q9HCC9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AC079776.2-201ENST00000641154 1609 ntBASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AL645939.2-201ENST00000427340 991 ntBASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 AC002310.6-201ENST00000624451 1377 ntBASIC20.71■□□□□ 0.91
ZFYVE28Q9HCC9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.7■□□□□ 0.91
ZFYVE28Q9HCC9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 RNF165-205ENST00000588679 2904 ntBASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ZFYVE28Q9HCC9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 MYLKP1-201ENST00000509077 1580 ntBASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ZFYVE28Q9HCC9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms