Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
MS4A6AQ9H2W1 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 MIR564-202ENST00000385049 94 ntBASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 AC036111.1-201ENST00000533973 1582 ntBASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
MS4A6AQ9H2W1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AC067852.2-201ENST00000590513 2313 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 INGX-201ENST00000359239 846 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AL499627.1-201ENST00000569373 2188 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 LINC01568-207ENST00000641790 1380 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AC112777.1-201ENST00000540175 1423 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 AL139384.1-201ENST00000612143 3047 ntBASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MS4A6AQ9H2W1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MS4A6AQ9H2W1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms