Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC091076.1-201ENST00000610741 619 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 AL358472.4-201ENST00000633140 710 ntBASIC19.21■□□□□ 0.67
LHX5Q9H2C1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.21■□□□□ 0.67
LHX5Q9H2C1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.2■□□□□ 0.66
LHX5Q9H2C1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 KRT18P48-201ENST00000434763 852 ntBASIC19.19■□□□□ 0.66
LHX5Q9H2C1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LHX5Q9H2C1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 LINC01311-201ENST00000565162 1445 ntBASIC19.18■□□□□ 0.66
LHX5Q9H2C1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LHX5Q9H2C1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms