Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 AC091607.1-201ENST00000490318 1060 ntBASIC21.15■□□□□ 0.98
SLF1Q9BQI6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 AC008687.5-201ENST00000593746 558 ntBASIC21.15■□□□□ 0.98
SLF1Q9BQI6 LINC01711-201ENST00000598340 967 ntBASIC21.15■□□□□ 0.98
SLF1Q9BQI6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 SDHAP2-201ENST00000455183 2001 ntBASIC21.15■□□□□ 0.98
SLF1Q9BQI6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLF1Q9BQI6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 NSUN5P1-202ENST00000421140 1535 ntBASIC21.14■□□□□ 0.98
SLF1Q9BQI6 NSUN5P2-203ENST00000457352 1529 ntBASIC21.14■□□□□ 0.98
SLF1Q9BQI6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SLF1Q9BQI6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 AC113404.2-201ENST00000507884 177 ntBASIC21.14■□□□□ 0.97
SLF1Q9BQI6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 AC011840.4-201ENST00000578471 627 ntBASIC21.14■□□□□ 0.97
SLF1Q9BQI6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.14■□□□□ 0.97
SLF1Q9BQI6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLF1Q9BQI6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 FDX1P1-201ENST00000449115 551 ntBASIC21.13■□□□□ 0.97
SLF1Q9BQI6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLF1Q9BQI6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 AL499627.1-201ENST00000569373 2188 ntBASIC21.12■□□□□ 0.97
SLF1Q9BQI6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
SLF1Q9BQI6 KRT8P10-201ENST00000450021 1447 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms