Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXB1Q99853 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FOXB1Q99853 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXB1Q99853 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.04■□□□□ 0.16
FOXB1Q99853 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXB1Q99853 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.04■□□□□ 0.16
FOXB1Q99853 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FOXB1Q99853 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 AL354751.1-201ENST00000412768 1863 ntBASIC16.03■□□□□ 0.16
FOXB1Q99853 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
FOXB1Q99853 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.03■□□□□ 0.16
FOXB1Q99853 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXB1Q99853 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
FOXB1Q99853 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
FOXB1Q99853 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.03■□□□□ 0.16
FOXB1Q99853 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXB1Q99853 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FOXB1Q99853 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.03■□□□□ 0.16
FOXB1Q99853 AC024563.2-201ENST00000603282 481 ntBASIC16.03■□□□□ 0.16
FOXB1Q99853 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXB1Q99853 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
FOXB1Q99853 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.03■□□□□ 0.16
FOXB1Q99853 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
FOXB1Q99853 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXB1Q99853 LINC01311-201ENST00000565162 1445 ntBASIC16.02■□□□□ 0.16
FOXB1Q99853 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
FOXB1Q99853 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.02■□□□□ 0.16
FOXB1Q99853 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
FOXB1Q99853 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXB1Q99853 HBZP1-201ENST00000354915 429 ntBASIC16.02■□□□□ 0.16
FOXB1Q99853 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
FOXB1Q99853 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXB1Q99853 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXB1Q99853 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.02■□□□□ 0.16
FOXB1Q99853 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.02■□□□□ 0.16
FOXB1Q99853 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.02■□□□□ 0.16
FOXB1Q99853 AL390961.4-201ENST00000623958 2535 ntBASIC16.02■□□□□ 0.15
FOXB1Q99853 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
FOXB1Q99853 AL096828.2-201ENST00000567259 1965 ntBASIC16.02■□□□□ 0.15
FOXB1Q99853 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
FOXB1Q99853 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
FOXB1Q99853 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.01■□□□□ 0.15
FOXB1Q99853 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 AL671277.2-201ENST00000458060 996 ntBASIC16.01■□□□□ 0.15
FOXB1Q99853 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.01■□□□□ 0.15
FOXB1Q99853 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.01■□□□□ 0.15
FOXB1Q99853 HYMAI.1-201ENST00000620949 238 ntBASIC16.01■□□□□ 0.15
FOXB1Q99853 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 KRT89P-201ENST00000620027 1478 ntBASIC16.01■□□□□ 0.15
FOXB1Q99853 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
FOXB1Q99853 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.01■□□□□ 0.15
FOXB1Q99853 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms