Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NPAS2Q99743 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPAS2Q99743 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS2Q99743 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS2Q99743 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS2Q99743 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS2Q99743 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.85■□□□□ 0.45
NPAS2Q99743 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.85■□□□□ 0.45
NPAS2Q99743 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 KRT8P32-201ENST00000512863 1461 ntBASIC17.85■□□□□ 0.45
NPAS2Q99743 AC112777.1-201ENST00000540175 1423 ntBASIC17.85■□□□□ 0.45
NPAS2Q99743 SLC25A1P4-201ENST00000567977 778 ntBASIC17.85■□□□□ 0.45
NPAS2Q99743 RN7SL850P-201ENST00000579959 291 ntBASIC17.85■□□□□ 0.45
NPAS2Q99743 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS2Q99743 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS2Q99743 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.85■□□□□ 0.45
NPAS2Q99743 MYC-208ENST00000641036 567 ntBASIC17.85■□□□□ 0.45
NPAS2Q99743 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NPAS2Q99743 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
NPAS2Q99743 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 PRORSD1P-202ENST00000563365 2154 ntBASIC17.84■□□□□ 0.45
NPAS2Q99743 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS2Q99743 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 INGX-201ENST00000359239 846 ntBASIC17.84■□□□□ 0.45
NPAS2Q99743 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 FAM207BP-201ENST00000447172 505 ntBASIC17.84■□□□□ 0.45
NPAS2Q99743 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS2Q99743 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.84■□□□□ 0.45
NPAS2Q99743 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
NPAS2Q99743 AC009053.2-201ENST00000563701 2365 ntBASIC17.84■□□□□ 0.45
NPAS2Q99743 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
NPAS2Q99743 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
NPAS2Q99743 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NPAS2Q99743 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NPAS2Q99743 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.83■□□□□ 0.45
NPAS2Q99743 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
NPAS2Q99743 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
NPAS2Q99743 AC096733.2-201ENST00000609937 1394 ntBASIC17.83■□□□□ 0.45
NPAS2Q99743 AC008556.1-201ENST00000610908 2040 ntBASIC17.83■□□□□ 0.45
NPAS2Q99743 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 AC005521.1-201ENST00000393351 872 ntBASIC17.83■□□□□ 0.44
NPAS2Q99743 MIR1224-201ENST00000408193 85 ntBASIC17.83■□□□□ 0.44
NPAS2Q99743 SLC25A6P5-201ENST00000435663 894 ntBASIC17.83■□□□□ 0.44
NPAS2Q99743 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.83■□□□□ 0.44
NPAS2Q99743 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
NPAS2Q99743 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.83■□□□□ 0.44
NPAS2Q99743 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.83■□□□□ 0.44
NPAS2Q99743 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NPAS2Q99743 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.82■□□□□ 0.44
NPAS2Q99743 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 KRT8P45-201ENST00000414328 1447 ntBASIC17.82■□□□□ 0.44
NPAS2Q99743 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
NPAS2Q99743 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.82■□□□□ 0.44
NPAS2Q99743 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NPAS2Q99743 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms