Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 KRT18P35-201ENST00000510488 1269 ntBASIC15.14■□□□□ 0.01
GAFA1Q96PS6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 AL121956.5-201ENST00000625261 221 ntBASIC15.14■□□□□ 0.01
GAFA1Q96PS6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.14■□□□□ 0.01
GAFA1Q96PS6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 AL390961.4-201ENST00000623958 2535 ntBASIC15.13■□□□□ 0.01
GAFA1Q96PS6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 AL136038.3-201ENST00000561909 1096 ntBASIC15.13■□□□□ 0.01
GAFA1Q96PS6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 AL445228.2-201ENST00000605589 952 ntBASIC15.13■□□□□ 0.01
GAFA1Q96PS6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GAFA1Q96PS6 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 LINC00167-201ENST00000530583 1419 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 IGHGP-201ENST00000390555 1178 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 RNF126P1-202ENST00000569893 925 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AC004263.2-201ENST00000617183 678 ntBASIC15.12■□□□□ 0.01
GAFA1Q96PS6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GAFA1Q96PS6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms