Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 AC036111.1-201ENST00000533973 1582 ntBASIC17.23■□□□□ 0.35
COL21A1Q96P44 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
COL21A1Q96P44 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL21A1Q96P44 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 AC008764.6-201ENST00000595909 2069 ntBASIC17.22■□□□□ 0.35
COL21A1Q96P44 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 AL137013.1-201ENST00000432946 1228 ntBASIC17.22■□□□□ 0.35
COL21A1Q96P44 ATP5G1P1-201ENST00000448724 379 ntBASIC17.22■□□□□ 0.35
COL21A1Q96P44 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
COL21A1Q96P44 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
COL21A1Q96P44 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL21A1Q96P44 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 MIR564-202ENST00000385049 94 ntBASIC17.21■□□□□ 0.35
COL21A1Q96P44 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COL21A1Q96P44 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL21A1Q96P44 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL21A1Q96P44 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
COL21A1Q96P44 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
COL21A1Q96P44 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL21A1Q96P44 KRT18P41-201ENST00000518924 1277 ntBASIC17.2■□□□□ 0.34
COL21A1Q96P44 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.2■□□□□ 0.34
COL21A1Q96P44 AC010203.1-204ENST00000548782 407 ntBASIC17.2■□□□□ 0.34
COL21A1Q96P44 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms