Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SUSD3Q96L08 AC125634.1-201ENST00000438758 1403 ntBASIC19.24■□□□□ 0.67
SUSD3Q96L08 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SUSD3Q96L08 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 RCN1P2-201ENST00000398357 915 ntBASIC19.23■□□□□ 0.67
SUSD3Q96L08 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 AL121912.1-201ENST00000603683 238 ntBASIC19.23■□□□□ 0.67
SUSD3Q96L08 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.23■□□□□ 0.67
SUSD3Q96L08 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SUSD3Q96L08 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 AC009078.2-202ENST00000463353 338 ntBASIC19.22■□□□□ 0.67
SUSD3Q96L08 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SUSD3Q96L08 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.22■□□□□ 0.67
SUSD3Q96L08 AC093010.1-201ENST00000473625 1624 ntBASIC19.22■□□□□ 0.67
SUSD3Q96L08 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 PHGDH-209ENST00000641074 1780 ntBASIC19.21■□□□□ 0.67
SUSD3Q96L08 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 AF238378.1-201ENST00000526806 358 ntBASIC19.21■□□□□ 0.67
SUSD3Q96L08 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.21■□□□□ 0.67
SUSD3Q96L08 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SUSD3Q96L08 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SUSD3Q96L08 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 AP002469.2-201ENST00000531724 424 ntBASIC19.2■□□□□ 0.66
SUSD3Q96L08 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.2■□□□□ 0.66
SUSD3Q96L08 AC011467.2-201ENST00000598425 242 ntBASIC19.2■□□□□ 0.66
SUSD3Q96L08 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms