Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 KRT18P65-201ENST00000439811 1286 ntBASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 TOB2P1-201ENST00000469761 992 ntBASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
SMARCD1Q96GM5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 AC093010.1-201ENST00000473625 1624 ntBASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 VENTXP7-201ENST00000475503 772 ntBASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SMARCD1Q96GM5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.1■□□□□ 0.65
SMARCD1Q96GM5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC093677.2-201ENST00000600169 1863 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC233702.3-201ENST00000578656 1387 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC132938.6-201ENST00000623828 1655 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC246785.2-201ENST00000432512 513 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AP000867.3-201ENST00000524675 377 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC011840.4-201ENST00000578471 627 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 MIR3652-201ENST00000579335 131 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 Z69720.1-201ENST00000601483 472 ntBASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.09■□□□□ 0.65
SMARCD1Q96GM5 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms