Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.29■□□□□ 0.68
TRIM11Q96F44 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRIM11Q96F44 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 ECEL1P2-202ENST00000465689 757 ntBASIC19.28■□□□□ 0.68
TRIM11Q96F44 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 AC024243.1-201ENST00000609234 778 ntBASIC19.28■□□□□ 0.68
TRIM11Q96F44 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRIM11Q96F44 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.28■□□□□ 0.68
TRIM11Q96F44 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.27■□□□□ 0.68
TRIM11Q96F44 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.27■□□□□ 0.68
TRIM11Q96F44 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 LETM1P2-201ENST00000597330 2178 ntBASIC19.27■□□□□ 0.68
TRIM11Q96F44 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRIM11Q96F44 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRIM11Q96F44 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 LINC01568-207ENST00000641790 1380 ntBASIC19.26■□□□□ 0.67
TRIM11Q96F44 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
TRIM11Q96F44 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRIM11Q96F44 KRT18P22-201ENST00000402024 1347 ntBASIC19.25■□□□□ 0.67
TRIM11Q96F44 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRIM11Q96F44 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.25■□□□□ 0.67
TRIM11Q96F44 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms