Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.58■□□□□ 0.56
RTP4Q96DX8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTP4Q96DX8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RTP4Q96DX8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RTP4Q96DX8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTP4Q96DX8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RTP4Q96DX8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 PVRIG2P-201ENST00000435460 978 ntBASIC18.56■□□□□ 0.56
RTP4Q96DX8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RTP4Q96DX8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RTP4Q96DX8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 AC012317.2-201ENST00000623305 2251 ntBASIC18.55■□□□□ 0.56
RTP4Q96DX8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.55■□□□□ 0.56
RTP4Q96DX8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 AC010203.1-204ENST00000548782 407 ntBASIC18.55■□□□□ 0.56
RTP4Q96DX8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 AC008687.5-201ENST00000593746 558 ntBASIC18.55■□□□□ 0.56
RTP4Q96DX8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RTP4Q96DX8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms