Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 AC009947.1-201ENST00000444350 727 ntBASIC23.22■■□□□ 1.31
SMARCC1Q92922 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.22■■□□□ 1.31
SMARCC1Q92922 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMARCC1Q92922 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 AC007967.2-201ENST00000432613 625 ntBASIC23.21■■□□□ 1.31
SMARCC1Q92922 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC23.21■■□□□ 1.31
SMARCC1Q92922 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMARCC1Q92922 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 MTDHP5-201ENST00000598980 586 ntBASIC23.2■■□□□ 1.3
SMARCC1Q92922 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMARCC1Q92922 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SMARCC1Q92922 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 AC097374.2-201ENST00000618617 1306 ntBASIC23.19■■□□□ 1.3
SMARCC1Q92922 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.19■■□□□ 1.3
SMARCC1Q92922 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 AIRN-201ENST00000601203 4374 ntBASIC23.19■■□□□ 1.3
SMARCC1Q92922 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMARCC1Q92922 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 PGM5P2-202ENST00000637225 1043 ntBASIC23.18■■□□□ 1.3
SMARCC1Q92922 AL022326.1-202ENST00000641533 845 ntBASIC23.18■■□□□ 1.3
SMARCC1Q92922 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.18■■□□□ 1.3
SMARCC1Q92922 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMARCC1Q92922 AC079776.2-201ENST00000641154 1609 ntBASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms