Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPS1Q92902 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HPS1Q92902 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPS1Q92902 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 AC018553.1-201ENST00000616682 1458 ntBASIC16.67■□□□□ 0.26
HPS1Q92902 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
HPS1Q92902 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HPS1Q92902 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS1Q92902 ECEL1P3-201ENST00000427961 737 ntBASIC16.67■□□□□ 0.26
HPS1Q92902 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS1Q92902 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.67■□□□□ 0.26
HPS1Q92902 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
HPS1Q92902 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HPS1Q92902 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 AC108860.2-201ENST00000562760 2183 ntBASIC16.67■□□□□ 0.26
HPS1Q92902 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HPS1Q92902 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 AC124283.5-201ENST00000624661 1809 ntBASIC16.66■□□□□ 0.26
HPS1Q92902 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HPS1Q92902 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
HPS1Q92902 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS1Q92902 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS1Q92902 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.66■□□□□ 0.26
HPS1Q92902 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.66■□□□□ 0.26
HPS1Q92902 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS1Q92902 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.66■□□□□ 0.26
HPS1Q92902 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.66■□□□□ 0.26
HPS1Q92902 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HPS1Q92902 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
HPS1Q92902 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HPS1Q92902 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms