Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
DDX1Q92499 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
DDX1Q92499 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX1Q92499 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX1Q92499 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 AP000523.1-201ENST00000398242 1049 ntBASIC19.41■□□□□ 0.7
DDX1Q92499 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX1Q92499 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX1Q92499 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 AL023973.1-201ENST00000624619 620 ntBASIC19.41■□□□□ 0.7
DDX1Q92499 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX1Q92499 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX1Q92499 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX1Q92499 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.41■□□□□ 0.7
DDX1Q92499 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX1Q92499 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
DDX1Q92499 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DDX1Q92499 PVRIG2P-201ENST00000435460 978 ntBASIC19.4■□□□□ 0.7
DDX1Q92499 SLC25A6P5-201ENST00000435663 894 ntBASIC19.4■□□□□ 0.7
DDX1Q92499 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.4■□□□□ 0.7
DDX1Q92499 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 AL441883.1-201ENST00000566170 1045 ntBASIC19.4■□□□□ 0.7
DDX1Q92499 CLEC4GP1-201ENST00000596555 870 ntBASIC19.4■□□□□ 0.7
DDX1Q92499 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX1Q92499 AC139887.4-201ENST00000607877 719 ntBASIC19.4■□□□□ 0.7
DDX1Q92499 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DDX1Q92499 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX1Q92499 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DDX1Q92499 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX1Q92499 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX1Q92499 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.39■□□□□ 0.7
DDX1Q92499 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX1Q92499 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX1Q92499 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DDX1Q92499 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX1Q92499 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 COX11P1-201ENST00000489116 835 ntBASIC19.39■□□□□ 0.69
DDX1Q92499 FAM86EP-206ENST00000510506 987 ntBASIC19.39■□□□□ 0.69
DDX1Q92499 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX1Q92499 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX1Q92499 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX1Q92499 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX1Q92499 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 AL031432.5-201ENST00000641059 760 ntBASIC19.39■□□□□ 0.69
DDX1Q92499 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DDX1Q92499 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
DDX1Q92499 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX1Q92499 AC005332.8-201ENST00000622750 2735 ntBASIC19.38■□□□□ 0.69
DDX1Q92499 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
DDX1Q92499 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX1Q92499 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms