Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.8■□□□□ 0.44
ATL1Q8WXF7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 BX664615.1-201ENST00000443558 458 ntBASIC17.8■□□□□ 0.44
ATL1Q8WXF7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 AC010203.1-204ENST00000548782 407 ntBASIC17.8■□□□□ 0.44
ATL1Q8WXF7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ATL1Q8WXF7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.79■□□□□ 0.44
ATL1Q8WXF7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.79■□□□□ 0.44
ATL1Q8WXF7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.79■□□□□ 0.44
ATL1Q8WXF7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 TERF1P1-201ENST00000311003 1181 ntBASIC17.78■□□□□ 0.44
ATL1Q8WXF7 AC211429.1-201ENST00000415277 523 ntBASIC17.78■□□□□ 0.44
ATL1Q8WXF7 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ATL1Q8WXF7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.77■□□□□ 0.44
ATL1Q8WXF7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms