Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.24■□□□□ 0.51
HMGB4Q8WW32 AL355877.3-201ENST00000622820 899 ntBASIC18.24■□□□□ 0.51
HMGB4Q8WW32 AC243591.1-201ENST00000452967 1364 ntBASIC18.24■□□□□ 0.51
HMGB4Q8WW32 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HMGB4Q8WW32 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 LINC00602-201ENST00000629776 2065 ntBASIC18.23■□□□□ 0.51
HMGB4Q8WW32 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 KRT18P13-201ENST00000400056 1290 ntBASIC18.23■□□□□ 0.51
HMGB4Q8WW32 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 KRT18P58-201ENST00000527480 1120 ntBASIC18.23■□□□□ 0.51
HMGB4Q8WW32 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 AL049840.3-201ENST00000602669 611 ntBASIC18.23■□□□□ 0.51
HMGB4Q8WW32 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
HMGB4Q8WW32 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 AC018712.1-201ENST00000455767 687 ntBASIC18.22■□□□□ 0.51
HMGB4Q8WW32 FGFR3P6-201ENST00000457012 610 ntBASIC18.22■□□□□ 0.51
HMGB4Q8WW32 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 AC009533.2-201ENST00000543664 586 ntBASIC18.22■□□□□ 0.51
HMGB4Q8WW32 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGB4Q8WW32 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 MIR940-201ENST00000401276 94 ntBASIC18.21■□□□□ 0.51
HMGB4Q8WW32 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 RBM17P3-201ENST00000417687 1192 ntBASIC18.21■□□□□ 0.51
HMGB4Q8WW32 MTCL1P1-201ENST00000446207 792 ntBASIC18.21■□□□□ 0.51
HMGB4Q8WW32 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGB4Q8WW32 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms