Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 KRT16P4-201ENST00000453883 522 ntBASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 VENTXP7-201ENST00000475503 772 ntBASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHKBP1Q8TBC3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 MIR149-201ENST00000384879 89 ntBASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.1■□□□□ 0.65
SHKBP1Q8TBC3 AC018470.1-201ENST00000624790 3129 ntBASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 AKR1C7P-201ENST00000305623 895 ntBASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 AP002469.2-201ENST00000531724 424 ntBASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 AC011840.4-201ENST00000578471 627 ntBASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
SHKBP1Q8TBC3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 AC099343.3-201ENST00000605834 2503 ntBASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHKBP1Q8TBC3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 NUS1P2-201ENST00000417358 873 ntBASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHKBP1Q8TBC3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms