Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 FLJ13224-201ENST00000313737 1514 ntBASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PIK3C3Q8NEB9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 AC008556.1-201ENST00000610908 2040 ntBASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 AC004951.3-201ENST00000418645 1148 ntBASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 AF186192.3-201ENST00000583427 947 ntBASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 RCC2P3-201ENST00000418112 1537 ntBASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.1■□□□□ 0.33
PIK3C3Q8NEB9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 RPS2P4-201ENST00000476944 856 ntBASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 KRT18P41-201ENST00000518924 1277 ntBASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 AC073195.1-201ENST00000607241 877 ntBASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 AP001412.1-201ENST00000608405 714 ntBASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PIK3C3Q8NEB9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms