Protein–RNA interactions for Protein: Q8NCR3

C11orf65, Uncharacterized protein C11orf65, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf65Q8NCR3 HOXB1-202ENST00000577092 1414 ntBASIC17.12■□□□□ 0.33
C11orf65Q8NCR3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C11orf65Q8NCR3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 FAM201B-201ENST00000458407 597 ntBASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 KRT8P7-201ENST00000533003 1432 ntBASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.11■□□□□ 0.33
C11orf65Q8NCR3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 CRYGFP-201ENST00000418459 633 ntBASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 MIR4674-201ENST00000582457 87 ntBASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 ITM2C-210ENST00000620962 501 ntBASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C11orf65Q8NCR3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 KRT18P29-201ENST00000397031 1267 ntBASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AP001412.1-201ENST00000608405 714 ntBASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 AC093010.1-201ENST00000473625 1624 ntBASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C11orf65Q8NCR3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
C11orf65Q8NCR3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms