Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 EMBP1-201ENST00000458200 901 ntBASIC20.62■□□□□ 0.89
RETREG2Q8NC44 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 TPSP2-201ENST00000561760 610 ntBASIC20.62■□□□□ 0.89
RETREG2Q8NC44 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.62■□□□□ 0.89
RETREG2Q8NC44 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AC010240.3-201ENST00000607688 395 ntBASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AL732292.2-201ENST00000609649 430 ntBASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 AC073592.3-201ENST00000625118 1834 ntBASIC20.61■□□□□ 0.89
RETREG2Q8NC44 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.61■□□□□ 0.89
RETREG2Q8NC44 HEIH-201ENST00000623091 1652 ntBASIC20.61■□□□□ 0.89
RETREG2Q8NC44 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 PVRIG2P-201ENST00000435460 978 ntBASIC20.6■□□□□ 0.89
RETREG2Q8NC44 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 AC012615.1-201ENST00000565797 1299 ntBASIC20.6■□□□□ 0.89
RETREG2Q8NC44 RNF126P1-202ENST00000569893 925 ntBASIC20.6■□□□□ 0.89
RETREG2Q8NC44 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.6■□□□□ 0.89
RETREG2Q8NC44 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 AP000347.1-202ENST00000435868 847 ntBASIC20.59■□□□□ 0.89
RETREG2Q8NC44 TOB2P1-201ENST00000469761 992 ntBASIC20.59■□□□□ 0.89
RETREG2Q8NC44 FOSL1P1-201ENST00000511041 816 ntBASIC20.59■□□□□ 0.89
RETREG2Q8NC44 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 MIR3180-4-201ENST00000582223 153 ntBASIC20.59■□□□□ 0.89
RETREG2Q8NC44 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.59■□□□□ 0.89
RETREG2Q8NC44 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms