Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC024563.2-201ENST00000603282 481 ntBASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 AC069148.1-201ENST00000608741 768 ntBASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH20Q8N6Y1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 KRT89P-201ENST00000620027 1478 ntBASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH20Q8N6Y1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 AP003733.1-201ENST00000491725 852 ntBASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 AC008687.5-201ENST00000593746 558 ntBASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 WIZP1-201ENST00000531444 2299 ntBASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH20Q8N6Y1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 AC135050.7-201ENST00000624508 2218 ntBASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDH20Q8N6Y1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 SDHAP2-201ENST00000455183 2001 ntBASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 AL133373.2-201ENST00000623187 2828 ntBASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDH20Q8N6Y1 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDH20Q8N6Y1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDH20Q8N6Y1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH20Q8N6Y1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDH20Q8N6Y1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDH20Q8N6Y1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms